PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.T4PBI
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 343aa    MW: 39261.2 Da    PI: 4.6023
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.T4PBIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.61.6e-11176219654
                  HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
          HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                   ++ErrRR+r+N++++ Lr ++Pk +      K++  +iL  +++Y+k+L
  Aradu.T4PBI 176 LMAERRRRKRLNDRLSMLRAIVPKiS------KMDRTSILGDTIDYMKEL 219
                  589*********************66......****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.237170219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474599.29E-15173232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.8E-11176225IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.2E-9177219IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.8E-15177234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.80E-4177223No hitNo description
CDDcd048739.72E-5269332No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MEIFYDDHHD FLEELMALRR ETFMETNYNN TTTFHSSFPP NSSSSSYQQE DLILPHQIYD  60
DNNFFNQIYD SLLFDEQSPP PLMMDHYSSS SYYSNNTSSN LDSYYPPLSF MEEEELQNLE  120
IETATRCKVE PVVTVTCCDS ESPAAIFNAD SVMGNKEIRK NNRSTKKVVG QPSKNLMAER  180
RRRKRLNDRL SMLRAIVPKI SKMDRTSILG DTIDYMKELL EKINNLQQEA VKVEDSNMAG  240
GIFKDVIKPN EILIRNSPKF EVERDVDNTR VEICCAGKPG MLLSTVNTLE ALGLDIQQCV  300
ISCFNDFTMH VSCSEEPEQR AMLSSEDIKQ ALFRSAGYGG RCL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178185ERRRRKRL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015935037.10.0PREDICTED: transcription factor bHLH93-like
SwissprotQ9LSL16e-80BH093_ARATH; Transcription factor bHLH93
TrEMBLA0A0B2PMU31e-120A0A0B2PMU3_GLYSO; Transcription factor bHLH93
TrEMBLI1K9L11e-120I1K9L1_SOYBN; Uncharacterized protein
STRINGGLYMA06G09670.11e-120(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118634103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.11e-80beta HLH protein 93